miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|62428203|gb|DN796397.1|DN796397 CGGCTTCGGCCAAAAACTGCTTACTGCTGCCTTCTGCGGCGGCTCTCGTGGCTTCATAAAGAACGCTGCTGCTGGTTACT
ATGCCAACCGTGGAGGAGCCACTTGGGCACCAGATTATGAATGGATCAAGCAGTTTGAGGGTCCAATTCTTCTGCCCCCG
GAAGAGCAGGACAATCTTCCACCACCTCTTTGGATGCAGAGGAAACCCCCGTTTGAGAAAAAGATTCGCAACGTAACCAT
CAACTTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCTGGATGGTGAGACTGTGATGCGTG
CAGATCCCCACATTGGGCTGCTGCACCGAGGAACAGAGAAGCTCATTGAATACAAGACATACACGCAGGCTCTTCCATAC
TTTGACCGTCTTGACTATGTGTCCATGATGTGCAATGAACAGGCATATTCGCTGGCTGTGGAGAAACTGCTCGGCCTGGA
GGCTCCCATCAGGGCCAAGTACATCCGTACCATGTTTGCTGAGGTTACACGCATCTTGAATCACTGCATGTTCTTGGGGG
CTCACGCTATGGATGTGGGCGCCCTCACTCCTTTCCTGTGGCTCTTTGAGGAACGTGAGAAGATGATGGAGTTCTATGAG
AGAGCTTCTGGTGCTCGCCTTCATGCAGCCTACGTTCGTCCT




Most similar to sp|Q0MQG3|NDUS2_PONPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q0MQG3|NDUS2_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFS2
           PE=2 SV=1
          Length = 463

 Score =  290 bits (743), Expect = 5e-78
 Identities = 132/193 (68%), Positives = 157/193 (81%)
 Frame = +2

Query: 104 WAPDYEWIKQFEGPILLPPEEQDNLPPPLWMQRKPPFEKKIRNVTINFGPQHPAAHGVLR 283
           W PD EW +QF G ++ P +E  +  PP W   +PP +  ++N+T+NFGPQHPAAHGVLR
Sbjct: 37  WQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLR 96

Query: 284 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQAYSLAVE 463
           LV+EL GE V + DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQAYSLAVE
Sbjct: 97  LVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 156

Query: 464 KLLGLEAPIRAKYIRTMFAEVTRILNHCMFLGAHAMDVGALTPFLWLFEEREKMMEFYER 643
           KLL +  P RA++IR +F E+TR+LNH M +  HA+D+GA+TPF WLFEEREKM EFYER
Sbjct: 157 KLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216

Query: 644 ASGARLHAAYVRP 682
            SGAR+HAAY+RP
Sbjct: 217 VSGARMHAAYIRP 229